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    Ribosomal protein L23/L15e family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830147, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L23/L15e family protein
    Primary source
    TAIR:AT4G39880
    Locus tag
    AT4G39880
    See related
    Araport:AT4G39880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J17.50; T5J17_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (18504489..18505472)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene TLD-domain containing nucleolar protein Neighboring gene RAB GTPase homolog H1C Neighboring gene adenine deaminase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120151.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein L23/L15e family protein
    NP_195698.1
    • Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L23/L15e, core (InterPro:IPR012678), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal protein L25/L23 (InterPro:IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species: Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Plants - 57; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18504489..18505472
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120151.3 → NP_195698.1  Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195698.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUW8, Q8LDI8, Q9SMR5
      Conserved Domains (1) summary
      pfam00276
      Location:37 → 89
      Ribosomal_L23; Ribosomal protein L23
    Nucleotide Protein
    Heading Accession and Version

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