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    Klhdc7a kelch domain containing 7A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298590, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Klhdc7aprovided by RGD
    Official Full Name
    kelch domain containing 7Aprovided by RGD
    Primary source
    RGD:1309439
    See related
    EnsemblRapid:ENSRNOG00000018867 AllianceGenome:RGD:1309439
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309439
    Summary
    Orthologous to human KLHDC7A (kelch domain containing 7A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 264.3), Heart (RPKM 40.5) and 5 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Klhdc7a in Genome Data Viewer
    Location:
    5q36
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (157501740..157507843, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (152218604..152224707, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (158433394..158440185, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene taste 1 receptor member 2 Neighboring gene paired box 7 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like Neighboring gene immunoglobin superfamily, member 21

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    kelch domain-containing protein 7A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001399527.1 → NP_001386456.1  kelch domain-containing protein 7A

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6ITN4
      Related
      ENSRNOP00000111212.1, ENSRNOT00000166552.1
      Conserved Domains (4) summary
      PHA03098
      Location:527 → 725
      PHA03098; kelch-like protein; Provisional
      PRK14086
      Location:42 → 237
      dnaA; chromosomal replication initiator protein DnaA
      sd00038
      Location:527 → 571
      Kelch; KELCH repeat [structural motif]
      cl28903
      Location:426 → 501
      BACK; BACK (BTB and C-terminal Kelch) domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      157501740..157507843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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