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    secE/sec61-gamma protein transport protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824017, updated on 18-Sep-2024

    Summary

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    Official Full Name
    secE/sec61-gamma protein transport protein
    Primary source
    TAIR:AT3G48570
    Locus tag
    AT3G48570
    See related
    Araport:AT3G48570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (18003818..18005272, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SHOOT GRAVITROPISM-like protein Neighboring gene chlorsulfuron/imidazolinone resistant 1 Neighboring gene miscRNA Neighboring gene xyloglucan endotransglucosylase/hydrolase 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_114716.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein targeting IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    secE/sec61-gamma protein transport protein
    NP_566909.1
    • secE/sec61-gamma protein transport protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, protein targeting, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein translocase SEC61 complex gamma subunit (InterPro:IPR008158), Protein secE/sec61-gamma protein (InterPro:IPR001901); BEST Arabidopsis thaliana protein match is: secE/sec61-gamma protein transport protein (TAIR:AT5G50460.1); Has 573 Blast hits to 573 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 132; Plants - 109; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18003818..18005272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114716.4 → NP_566909.1  secE/sec61-gamma protein transport protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566909.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SMP2
      UniProtKB/TrEMBL
      A0A178VBI0, A0A384L6E4, Q2HIR4
      Conserved Domains (1) summary
      cl00481
      Location:11 → 68
      SecE; SecE/Sec61-gamma subunits of protein translocation complex
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SMP2.1

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