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    Outer membrane OMP85 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824022, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Outer membrane OMP85 family protein
    Primary source
    TAIR:AT3G48620
    Locus tag
    AT3G48620
    See related
    Araport:AT3G48620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (18015983..18017821)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SWIB complex BAF60b domain-containing protein Neighboring gene non-specific phospholipase C6 Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Outer membrane OMP85 family protein
    NP_190431.5
    • Outer membrane OMP85 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: outer membrane; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 503 Blast hits to 503 proteins in 137 species: Archae - 0; Bacteria - 247; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18015983..18017821
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114721.6 → NP_190431.5  Outer membrane OMP85 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190431.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JF35, Q9SMN7
      UniProtKB/TrEMBL
      A0A654FDJ7
      Conserved Domains (1) summary
      TIGR00992
      Location:90 → 300
      3a0901s03IAP75; chloroplast envelope protein translocase, IAP75 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JF35.1

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