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    Mrps26 mitochondrial ribosomal protein S26 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362216, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mrps26provided by RGD
    Official Full Name
    mitochondrial ribosomal protein S26provided by RGD
    Primary source
    RGD:1308733
    See related
    EnsemblRapid:ENSRNOG00000021224 AllianceGenome:RGD:1308733
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in mitochondrion and nucleoplasm. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS26 (mitochondrial ribosomal protein S26). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Thymus (RPKM 229.8), Adrenal (RPKM 187.2) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mrps26 in Genome Data Viewer
    Location:
    3q36
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (138222324..138223987)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (117769220..117770883)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (123093264..123094927)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene PC-esterase domain containing 1A Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene protein tyrosine phosphatase, receptor type, A Neighboring gene uncharacterized LOC134486445 Neighboring gene oxytocin/neurophysin I prepropeptide Neighboring gene arginine vasopressin

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    small ribosomal subunit protein mS26
    Names
    28S ribosomal protein S26, mitochondrial
    5'OT-EST protein
    MRP-S26
    S26mt
    protein 5'OT-EST

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013206.2NP_001013224.1  small ribosomal subunit protein mS26 precursor

      See identical proteins and their annotated locations for NP_001013224.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000003
      UniProtKB/Swiss-Prot
      Q9EPJ3
      UniProtKB/TrEMBL
      A0A8L2QFW5, A6HQ96
      Related
      ENSRNOP00000028828.4, ENSRNOT00000028828.6
      Conserved Domains (1) summary
      pfam14943
      Location:28197
      MRP-S26; Mitochondrial ribosome subunit S26

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      138222324..138223987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)