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    patatin-like phospholipase domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844034, updated on 18-Sep-2024

    Summary

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    Official Full Name
    patatin-like phospholipase domain protein
    Primary source
    TAIR:AT1G76980
    Locus tag
    AT1G76980
    See related
    Araport:AT1G76980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22K20.8; F22K20_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28925708..28927391, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Target of Myb protein 1 Neighboring gene ncRNA Neighboring gene ACT domain repeat 3 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001161001.2
    NM_106349.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    patatin-like phospholipase domain protein
    NP_001154473.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_177824.1
    • BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28925708..28927391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001161001.2 → NP_001154473.1  patatin-like phospholipase domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154473.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDU6, F4I5I6

    2. NM_106349.3 → NP_177824.1  patatin-like phospholipase domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177824.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDS0, A0A178WDU6, O49284
    Nucleotide Protein
    Heading Accession and Version

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