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    NEP-interacting protein (DUF239) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819030, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NEP-interacting protein (DUF239)
    Primary source
    TAIR:AT2G44220
    Locus tag
    AT2G44220
    See related
    Araport:AT2G44220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I1.3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (18283789..18285837)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pre-mRNA splicing factor domain-containing protein Neighboring gene carboxyl-terminal peptidase (DUF239) Neighboring gene hypothetical protein (DUF946) Neighboring gene NEP-interacting protein (DUF239)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129986.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NEP-interacting protein (DUF239)
    NP_181951.3
    • Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT2G44240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18283789..18285837
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129986.4 → NP_181951.3  NEP-interacting protein (DUF239) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181951.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F1T9, F4IT63, O64857
      Conserved Domains (2) summary
      pfam03080
      Location:174 → 396
      DUF239; Domain of unknown function (DUF239)
      pfam14365
      Location:49 → 158
      DUF4409; Domain of unknown function (DUF4409)
    Nucleotide Protein
    Heading Accession and Version

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