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    hypothetical protein (DUF946) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819031, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF946)
    Primary source
    TAIR:AT2G44230
    Locus tag
    AT2G44230
    See related
    Araport:AT2G44230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I1.4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18286321..18288576)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene carboxyl-terminal peptidase (DUF239) Neighboring gene NEP-interacting protein (DUF239) Neighboring gene NEP-interacting protein (DUF239) Neighboring gene tRNA-splicing ligase, putative (DUF239)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129987.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF946)
    NP_030961.1
    • Plant protein of unknown function (DUF946); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT2G44260.1); Has 432 Blast hits to 414 proteins in 115 species: Archae - 0; Bacteria - 34; Metazoa - 43; Fungi - 133; Plants - 207; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18286321..18288576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129987.3 → NP_030961.1  hypothetical protein (DUF946) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_030961.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F1S3, A0A7G2EG66, O64858
      Conserved Domains (1) summary
      pfam06101
      Location:17 → 541
      Vps62; Vacuolar protein sorting-associated protein 62
    Nucleotide Protein
    Heading Accession and Version

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