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    CG43187 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798317, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG43187provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262816
    Locus tag
    Dmel_CG43187
    See related
    AllianceGenome:FB:FBgn0262816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG43187; DMG8-chr2R.23.004; lincRNA.322
    Orthologs
    all
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    Genomic context

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    See CG43187 in Genome Data Viewer
    Location:
    53C3-53C4; 2-80 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16380516..16385765)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12268021..12273270)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45316 Neighboring gene long non-coding RNA:CR45317 Neighboring gene Semaphorin 2b Neighboring gene Malic enzyme like-1 Neighboring gene Malic enzyme like-2 Neighboring gene jetboil

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    4. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article
    5. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: 16383201-16383298 mobile_element_type = transposon:INE-1{}4503

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43187-PA
    CG43187-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16380516..16385765
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299562.1 → NP_001286491.1  uncharacterized protein Dmel_CG43187, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286491.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K816

    2. NM_001259437.2 → NP_001246366.1  uncharacterized protein Dmel_CG43187, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K816
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K816 A0A0B4K816

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials