Major facilitator superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Major facilitator superfamily protein
Primary source: TAIR:AT5G25040
Locus tag: AT5G25040
See related: Araport:AT5G25040
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T11H3.50; T11H3_50
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 7

Sequence:: Chromosome: 5; NC_003076.8 (8621900..8624484)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

At-8BJ-042 (e-PCR)
- UniSTS:229417

NM_001203461.1

Supported by ESTs:

NM_001343907.1

Supported by ESTs:

NM_001343908.1

Supported by ESTs:

NM_001343909.1

Supported by ESTs:

NM_122413.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in plastid	HDA more info	PubMed

General protein information

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Preferred Names: Major facilitator superfamily protein

NP_001190390.1

Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1).

NP_001318642.1

Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1).

NP_197886.3

Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 755 Blast hits to 740 proteins in 152 species: Archae - 2; Bacteria - 152; Metazoa - 0; Fungi - 11; Plants - 247; Viruses - 0; Other Eukaryotes - 343 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

8621900..8624484

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001343907.1 → NP_001318642.1 Major facilitator superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2H1ZE79
NM_001343908.1 → NP_001331109.1 Major facilitator superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

F4KIL8, F4KIM0, Q67YF0

UniProtKB/TrEMBL

A0A178UDG4, A0A5S9Y853
NM_001343909.1 → NP_001331108.1 Major facilitator superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BCU0
NM_001203461.1 → NP_001190390.1 Major facilitator superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001190390.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UDG4, A0A5S9Y853

Conserved Domains (2) summary

pfam03092
Location:57 → 479

BT1; BT1 family

cl21472
Location:71 → 499

MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
NM_122413.4 → NP_197886.3 Major facilitator superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_197886.3

Status: REVIEWED

UniProtKB/TrEMBL

A0A178UDG4, A0A5S9Y853, F4KIL9

Conserved Domains (2) summary

pfam07690
Location:58 → 407

MFS_1; Major Facilitator Superfamily

cl21472
Location:71 → 422

MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...