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    Pathogenesis-related thaumatin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838514, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pathogenesis-related thaumatin superfamily protein
    Primary source
    TAIR:AT1G19320
    Locus tag
    AT1G19320
    See related
    Araport:AT1G19320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18O14.4; F18O14_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (6679281..6680252)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene histone deacetylase complex subunit Neighboring gene Methyltransferase MT-A70 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_101789.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pathogenesis-related thaumatin superfamily protein
    NP_173365.2
    • Pathogenesis-related thaumatin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: thaumatin-like protein 3 (TAIR:AT1G75030.1); Has 1611 Blast hits to 1588 proteins in 180 species: Archae - 0; Bacteria - 48; Metazoa - 52; Fungi - 78; Plants - 1416; Viruses - 5; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6679281..6680252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101789.4 → NP_173365.2  Pathogenesis-related thaumatin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173365.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WNM2, A0A5S9V4L4, A0A654EBB0, Q9LN66
      Conserved Domains (1) summary
      cd09218
      Location:27 → 246
      TLP-PA; allergenic/antifungal thaumatin-like proteins: plant and animal homologs
    Nucleotide Protein
    Heading Accession and Version

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