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    Ppr-Y Ppr-Y [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355180, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ppr-Yprovided by FlyBase
    Official Full Name
    Ppr-Yprovided by FlyBase
    Primary source
    FLYBASE:FBgn0046697
    Locus tag
    Dmel_CG40440
    See related
    AllianceGenome:FB:FBgn0046697
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG40440; Dmel\CG40440; FBgn0046697; PPR; PpR-Y; PPr-Y; PprY
    Summary
    Predicted to be active in cilium. Orthologous to human DRC3 (dynein regulatory complex subunit 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Ppr-Y in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) Y NC_024512.1 (1636574..1884846)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) YHet NW_001848860.1 (156742..206246)

    Chromosome Y - NC_024512.1Genomic Context describing neighboring genes Neighboring gene Supressor of Stellate:CR45796 Neighboring gene long non-coding RNA:CR40629 Neighboring gene pseudo Neighboring gene pseudo Neighboring gene WD40 Y Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insight Into Spinocerebellar Ataxia Type 31 (SCA31) From Drosophila Model. Ishiguro T, et al. Front Neurosci, 2021. PMID 34113230, Free PMC Article
    2. Identification of five new genes on the Y chromosome of Drosophila melanogaster. Carvalho AB, et al. Proc Natl Acad Sci U S A, 2001 Nov 6. PMID 11687639, Free PMC Article
    3. Selection and geography shape male reproductive tract transcriptomes in Drosophila melanogaster. Cridland JM, et al. Genetics, 2023 May 4. PMID 36869688, Free PMC Article
    4. Positive and purifying selection on the Drosophila Y chromosome. Singh ND, et al. Mol Biol Evol, 2014 Oct. PMID 24974375, Free PMC Article
    5. Drosophila melanogaster Y Chromosome Genes Affect Male Sensitivity to Microbial Infections. Bartolo G, et al. Insects, 2021 Jan 5. PMID 33466347, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: 1793504-1797021 mobile_element_type = transposon:Dm88{}6511

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Ppr-Y
    Names
    CG40440-PB
    Ppr-Y-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_024512.1 Reference assembly

      Range
      1636574..1884846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001015502.3 → NP_001015502.3  Ppr-Y [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LJN9, Q95V50
      Conserved Domains (3) summary
      sd00031
      Location:63 → 82
      LRR_1; leucine-rich repeat [structural motif]
      pfam12799
      Location:81 → 121
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:81 → 137
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95V43 Q95V43
    Q95V50 Q95V50

    Gene LinkOut

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