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    GA2OX6 gibberellin 2-oxidase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839508, updated on 14-Nov-2024

    Summary

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    Official Symbol
    GA2OX6
    Official Full Name
    gibberellin 2-oxidase 6
    Primary source
    TAIR:AT1G02400
    Locus tag
    AT1G02400
    See related
    Araport:AT1G02400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana gibberellin 2-oxidase 4; ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 4; ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6; ATGA2OX4; ATGA2OX6; DOWNSTREAM TARGET OF AGL15 1; DTA1; gibberellin 2-oxidase 6; T6A9.9; T6A9_9
    Summary
    Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins.
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    Genomic context

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    See GA2OX6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (486800..489651)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene glycerol-3-phosphate acyltransferase 2 Neighboring gene proline-rich family protein Neighboring gene cytochrome c oxidase assembly protein CtaG / Cox11 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. Rieu I, et al. Plant Cell, 2008 Sep. PMID 18805991, Free PMC Article
    2. Regulation of hormone metabolism in Arabidopsis seeds: phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism. Seo M, et al. Plant J, 2006 Nov. PMID 17010113
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001331335.1
    NM_100121.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    NOT enables gibberellin 2-beta-dioxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables gibberellin 2-beta-dioxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gibberellin catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to red or far red light IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 2-oxidase 6
    NP_171742.1
    • gibberellin 2-oxidase 6 (GA2OX6); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase 4 (TAIR:AT1G47990.1); Has 8143 Blast hits to 8109 proteins in 973 species: Archae - 0; Bacteria - 1087; Metazoa - 68; Fungi - 840; Plants - 4773; Viruses - 0; Other Eukaryotes - 1375 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      486800..489651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100121.5 → NP_171742.1  gibberellin 2-oxidase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171742.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56Y91, Q9FZ21
      UniProtKB/TrEMBL
      A0A5S9S835, A0A654E7D9, A0A7G2DTM9
      Conserved Domains (1) summary
      PLN02156
      Location:25 → 327
      PLN02156; gibberellin 2-beta-dioxygenase

    2. NM_001331335.1 → NP_001323245.1  gibberellin 2-oxidase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWJ2
      Conserved Domains (1) summary
      PLN02156
      Location:25 → 251
      PLN02156; gibberellin 2-beta-dioxygenase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZ21.1

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