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    ATCHX1 Cation/hydrogen exchanger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838208, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCHX1
    Official Full Name
    Cation/hydrogen exchanger family protein
    Primary source
    TAIR:AT1G16380
    Locus tag
    AT1G16380
    See related
    Araport:AT1G16380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CATION EXCHANGER 1; CHX1; F3O9.18; F3O9_18
    Summary
    member of Putative Na+/H+ antiporter family
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    Genomic context

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    See ATCHX1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (5598411..5601367, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Aldolase superfamily protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein Neighboring gene organic cation/carnitine transporter 6 Neighboring gene organic cation/carnitine transporter 3 Neighboring gene cytochrome P450, family 79, subfamily F, polypeptide 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cation/hydrogen exchanger family protein
    NP_173088.1
    • ATCHX1; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 2 (TAIR:AT1G79400.1); Has 3057 Blast hits to 3030 proteins in 956 species: Archae - 198; Bacteria - 2123; Metazoa - 0; Fungi - 129; Plants - 509; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5598411..5601367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101504.2 → NP_173088.1  Cation/hydrogen exchanger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173088.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SA37
      UniProtKB/TrEMBL
      A0A178WFC6
      Conserved Domains (1) summary
      PLN03159
      Location:16 → 775
      PLN03159; cation/H(+) antiporter 15; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SA37.1

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