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    alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820334, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha/beta-Hydrolases superfamily protein
    Primary source
    TAIR:AT3G11620
    Locus tag
    AT3G11620
    See related
    Araport:AT3G11620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (3669319..3672207, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene bric-a-brac protein Neighboring gene ncRNA Neighboring gene E3 ubiquitin-protein ligase Neighboring gene Thioredoxin superfamily protein Neighboring gene uncharacterized protein Neighboring gene NDR1/HIN1-like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_001035595.1
    NM_001337942.1
    NM_001337943.1
    NM_001337944.1
    NM_001337945.1
    NM_001337946.1
    NM_111994.2
    NM_180229.4
    NM_202558.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid storage IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha/beta-Hydrolases superfamily protein
    NP_001030672.1
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_566394.1
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
    NP_850560.1
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
    NP_974287.1
    • alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3669319..3672207 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180229.4 → NP_850560.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850560.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8W4, A0A384KHB3, A0A5S9XBD3, Q0WPD9, Q8LFP3
      Conserved Domains (1) summary
      pfam10230
      Location:37 → 287
      LIDHydrolase; Lipid-droplet associated hydrolase

    2. NM_001337942.1 → NP_001327054.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR49, Q8LFP3

    3. NM_001337943.1 → NP_001327051.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9X6, A0A1I9LR46, A0A384LKX1, A0A5S9XBD3

    4. NM_001337945.1 → NP_001327052.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8W4, A0A384KHB3, A0A5S9XBD3, Q0WPD9, Q8LFP3
      Conserved Domains (1) summary
      pfam10230
      Location:37 → 287
      LIDHydrolase; Lipid-droplet associated hydrolase

    5. NM_001337944.1 → NP_001327055.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9X6, A0A1I9LR46, A0A384LKX1, A0A5S9XBD3

    6. NM_001035595.1 → NP_001030672.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030672.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J7E1
      Conserved Domains (2) summary
      pfam07889
      Location:8 → 35
      DUF1664; Protein of unknown function (DUF1664)
      cl21494
      Location:37 → 232
      Abhydrolase; alpha/beta hydrolases

    7. NM_202558.2 → NP_974287.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974287.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J7E1
      Conserved Domains (2) summary
      pfam07889
      Location:8 → 35
      DUF1664; Protein of unknown function (DUF1664)
      cl21494
      Location:37 → 232
      Abhydrolase; alpha/beta hydrolases

    8. NM_111994.2 → NP_566394.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566394.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8W4, A0A384KHB3, A0A5S9XBD3, Q0WPD9, Q8LFP3
      Conserved Domains (1) summary
      pfam10230
      Location:37 → 287
      LIDHydrolase; Lipid-droplet associated hydrolase

    9. NM_001337946.1 → NP_001327053.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9X6, A0A1I9LR46, A0A384LKX1, A0A5S9XBD3
    Nucleotide Protein
    Heading Accession and Version

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