U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    WAPL (Wings apart-like protein regulation of heterochromatin) protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842394, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    WAPL (Wings apart-like protein regulation of heterochromatin) protein
    Primary source
    TAIR:AT1G61030
    Locus tag
    AT1G61030
    See related
    Araport:AT1G61030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtWAPL2; T7P1.16; T7P1_16; WAPL2; Wings apart-like protein 2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (22477896..22482451)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specificity factor 73-I Neighboring gene tRNA-Arg Neighboring gene plus-3 domain-containing protein Neighboring gene alpha 1,4-glycosyltransferase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Opposing Actions of Arabidopsis CHROMOSOME TRANSMISSION FIDELITY7 and WINGS APART-LIKE1 and 2 Differ in Mitotic and Meiotic Cells. De K, et al. Plant Cell, 2016 Feb. PMID 26813623, Free PMC Article
    2. Arabidopsis thaliana WAPL is essential for the prophase removal of cohesin during meiosis. De K, et al. PLoS Genet, 2014 Jul. PMID 25033056, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_104783.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within meiotic chromosome segregation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in meiotic sister chromatid cohesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within meiotic sister chromatid cohesion involved in meiosis I IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in mitotic sister chromatid cohesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mitotic sister chromatid segregation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    WAPL (Wings apart-like protein regulation of heterochromatin) protein
    NP_176298.1
    • WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G11060.1); Has 250 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 174; Fungi - 3; Plants - 50; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22477896..22482451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104783.3 → NP_176298.1  WAPL (Wings apart-like protein regulation of heterochromatin) protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176298.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q681R1, Q9C951
      UniProtKB/TrEMBL
      A0A5S9WNN3
      Conserved Domains (1) summary
      pfam07814
      Location:77 → 376
      WAPL; Wings apart-like protein regulation of heterochromatin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C951.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools