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    Bacterial sec-independent translocation protein mttA/Hcf106 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832987, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Bacterial sec-independent translocation protein mttA/Hcf106
    Primary source
    TAIR:AT5G28750
    Locus tag
    AT5G28750
    See related
    Araport:AT5G28750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32B20.2; T32B20_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (10783974..10785728, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nuclease Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Soluble TatA forms oligomers that interact with membranes: Structure and insertion studies of a versatile protein transporter. Pettersson P, et al. Biochim Biophys Acta Biomembr, 2021 Feb 1. PMID 33279512
    2. Tat subunit stoichiometry in Arabidopsis thaliana challenges the proposed function of TatA as the translocation pore. Jakob M, et al. Biochim Biophys Acta, 2009 Feb. PMID 18930082
    3. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
    4. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_122758.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport by the Tat complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein transport within lipid bilayer IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TAT protein transport complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bacterial sec-independent translocation protein mttA/Hcf106
    NP_198227.1
    • Bacterial sec-independent translocation protein mttA/Hcf106; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast thylakoid membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial sec-independent translocation protein mttA/Hcf106 (InterPro:IPR003369), Twin-arginine translocation protein TatA/E (InterPro:IPR006312); BEST Arabidopsis thaliana protein match is: Bacterial sec-independent translocation protein mttA/Hcf106 (TAIR:AT5G52440.1); Has 3112 Blast hits to 3112 proteins in 1115 species: Archae - 68; Bacteria - 2578; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      10783974..10785728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122758.4 → NP_198227.1  Bacterial sec-independent translocation protein mttA/Hcf106 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198227.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LKU2
      UniProtKB/TrEMBL
      A0A178USC3, A0A5S9Y828
      Conserved Domains (1) summary
      cl00788
      Location:64 → 146
      MttA_Hcf106; mttA/Hcf106 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LKU2.1

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