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    TLP-3 thaumatin-like protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843841, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TLP-3
    Official Full Name
    thaumatin-like protein 3
    Primary source
    TAIR:AT1G75030
    Locus tag
    AT1G75030
    See related
    Araport:AT1G75030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATLP-3; thaumatin-like protein 3
    Summary
    encodes a PR5-like protein
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    Genomic context

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    See TLP-3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28174187..28175456)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GTP binding protein Neighboring gene lysophosphatidyl acyltransferase 4 Neighboring gene pathogenesis-related protein 5 Neighboring gene Pathogenesis-related thaumatin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Thaumatin-like genes function in the control of both biotic stress signaling and ABA signaling pathways. Park EJ, et al. Biochem Biophys Res Commun, 2021 Aug 27. PMID 34130180
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Thaumatin-like genes function in the control of both biotic stress signaling and ABA signaling pathways.
      Title: Thaumatin-like genes function in the control of both biotic stress signaling and ABA signaling pathways.
    Submit: New GeneRIF Correction

    General gene information

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    NM_106160.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    thaumatin-like protein 3
    NP_177640.1
    • thaumatin-like protein 3 (TLP-3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1604 Blast hits to 1584 proteins in 178 species: Archae - 0; Bacteria - 37; Metazoa - 52; Fungi - 78; Plants - 1423; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28174187..28175456
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106160.3 → NP_177640.1  thaumatin-like protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177640.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W858, A0A5S9WUG3, O24468, Q9C9P9
      Conserved Domains (1) summary
      cd09218
      Location:25 → 242
      TLP-PA; allergenic/antifungal thaumatin-like proteins: plant and animal homologs
    Nucleotide Protein
    Heading Accession and Version

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