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    SAP domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836818, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SAP domain-containing protein
    Primary source
    TAIR:AT5G66840
    Locus tag
    AT5G66840
    See related
    Araport:AT5G66840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUD21.10; MUD21_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (26692702..26695384, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene F-box protein (DUF295) Neighboring gene mitogen-activated protein kinase kinase kinase 5 Neighboring gene Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SAP domain-containing protein
    NP_001318892.1
    • SAP domain-containing protein; FUNCTIONS IN: DNA binding, nucleic acid binding; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26692702..26695384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345805.1 → NP_001318892.1  SAP domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YIF8, A0A654GEQ6, Q9FKZ6
      Conserved Domains (2) summary
      PRK14086
      Location:339 → 479
      dnaA; chromosomal replication initiator protein DnaA
      pfam02037
      Location:90 → 124
      SAP; SAP domain

    2. NM_126083.2 → NP_201485.1  SAP domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201485.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YIF8, A0A654GEQ6, Q9FKZ6
      Conserved Domains (2) summary
      PRK14086
      Location:339 → 479
      dnaA; chromosomal replication initiator protein DnaA
      pfam02037
      Location:90 → 124
      SAP; SAP domain
    Nucleotide Protein
    Heading Accession and Version

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