U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CTF2A FAD/NAD(P)-binding oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818135, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CTF2A
    Official Full Name
    FAD/NAD(P)-binding oxidoreductase family protein
    Primary source
    TAIR:AT2G35660
    Locus tag
    AT2G35660
    See related
    Araport:AT2G35660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20F21.15; T20F21_15
    Summary
    Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CTF2A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (14988437..14990426)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Homeodomain-like superfamily protein Neighboring gene cellulose synthase like Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene VEFS-Box of polycomb protein Neighboring gene Phosphotyrosine protein phosphatases superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001036412.1
    NM_129121.3
    NM_201877.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    FAD/NAD(P)-binding oxidoreductase family protein
    NP_001031489.1
    • CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_565814.1
    • CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 9259 Blast hits to 9227 proteins in 1442 species: Archae - 27; Bacteria - 5652; Metazoa - 91; Fungi - 1745; Plants - 591; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink).
    NP_973606.1
    • CTF2A; FUNCTIONS IN: monooxygenase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G29720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14988437..14990426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129121.3 → NP_565814.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565814.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8LFU3, Q9ZQN9
      Conserved Domains (2) summary
      COG0654
      Location:46 → 424
      UbiH; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]
      cl21454
      Location:46 → 380
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. NM_201877.3 → NP_973606.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973606.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0S6, F4IKT4
      Conserved Domains (1) summary
      PRK06753
      Location:5 → 305
      PRK06753; hypothetical protein; Provisional

    3. NM_001036412.1 → NP_001031489.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031489.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W0S6, F4IKT4
      Conserved Domains (1) summary
      PRK06753
      Location:5 → 305
      PRK06753; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.