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    ROH1, putative (DUF793) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828453, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ROH1, putative (DUF793)
    Primary source
    TAIR:AT4G23530
    Locus tag
    AT4G23530
    See related
    Araport:AT4G23530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16G20.230; F16G20_230
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (12278915..12280851)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA Neighboring gene ARM repeat superfamily protein Neighboring gene WRKY family transcription factor Neighboring gene glycosyl hydrolase 9B15 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118484.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ROH1, putative (DUF793)
    NP_194084.1
    • INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G11300.1); Has 140 Blast hits to 137 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12278915..12280851
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118484.4 → NP_194084.1  ROH1, putative (DUF793) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194084.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5E1, O81749
      Conserved Domains (1) summary
      cl21731
      Location:2 → 390
      DUF677; Protein of unknown function (DUF677)
    Nucleotide Protein
    Heading Accession and Version

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