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    FBD, F-box and Leucine Rich Repeat domains containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835770, updated on 18-Sep-2024

    Summary

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    Official Full Name
    FBD, F-box and Leucine Rich Repeat domains containing protein
    Primary source
    TAIR:AT5G56690
    Locus tag
    AT5G56690
    See related
    Araport:AT5G56690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIK19.14; MIK19_14
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (22939723..22941099)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene IAA-leucine resistant (ILR)-like 2 Neighboring gene Ribosomal protein S30 family protein Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene FBD / Leucine Rich Repeat domains containing protein Neighboring gene Ribosomal protein L31e family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FBD, F-box and Leucine Rich Repeat domains containing protein
    NP_200480.1
    • FBD, F-box and Leucine Rich Repeat domains containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD / Leucine Rich Repeat domains containing protein (TAIR:AT5G56700.1); Has 2091 Blast hits to 2055 proteins in 38 species: Archae - 0; Bacteria - 13; Metazoa - 7; Fungi - 0; Plants - 2069; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22939723..22941099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125052.1 → NP_200480.1  FBD, F-box and Leucine Rich Repeat domains containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200480.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FJU3
      UniProtKB/TrEMBL
      A0A5S9YEP0
      Conserved Domains (4) summary
      sd00032
      Location:136 → 157
      LRR_2; leucine-rich repeat [structural motif]
      pfam07723
      Location:157 → 182
      LRR_2; Leucine Rich Repeat
      pfam00646
      Location:4 → 46
      F-box; F-box domain
      pfam08387
      Location:356 → 399
      FBD
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJU3.1

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