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    Thioredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824809, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Thioredoxin superfamily protein
    Primary source
    TAIR:AT3G56420
    Locus tag
    AT3G56420
    See related
    Araport:AT3G56420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (20921639..20923329, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 70 Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF3133) Neighboring gene import inner membrane translocase subunit Neighboring gene autophagy 18 D-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Thioredoxin superfamily protein
    NP_191201.4
    • Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: C-terminal cysteine residue is changed to a serine 2 (TAIR:AT2G40790.1); Has 16726 Blast hits to 16570 proteins in 2924 species: Archae - 262; Bacteria - 9349; Metazoa - 1819; Fungi - 717; Plants - 1411; Viruses - 13; Other Eukaryotes - 3155 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20921639..20923329 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339795.1 → NP_001325846.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LMG8, Q9LXZ8
      UniProtKB/TrEMBL
      A0A5S9XLC5, A0A654FGF6
      Conserved Domains (1) summary
      cd02947
      Location:49 → 142
      TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...

    2. NM_001339794.1 → NP_001325847.1  Thioredoxin superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LMG8, Q9LXZ8
      UniProtKB/TrEMBL
      A0A5S9XLC5, A0A654FGF6
      Conserved Domains (1) summary
      cd02947
      Location:49 → 142
      TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...

    3. NM_115500.4 → NP_191201.4  Thioredoxin superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191201.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1I9LMG8, Q9LXZ8
      UniProtKB/TrEMBL
      A0A5S9XLC5, A0A654FGF6
      Conserved Domains (1) summary
      cd02947
      Location:49 → 142
      TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXZ8.2

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