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    SLOMO F-box family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829457, updated on 18-Sep-2024

    Summary

    Official Symbol
    SLOMO
    Official Full Name
    F-box family protein
    Primary source
    TAIR:AT4G33210
    Locus tag
    AT4G33210
    See related
    Araport:AT4G33210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4I10.140; F4I10_140; SLOW MOTION
    Summary
    Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem.
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    Genomic context

    See SLOMO in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    17
    Sequence:
    Chromosome: 4; NC_003075.7 (16015640..16021230, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene myosin Neighboring gene pectin methylesterase 44 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_119475.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    F-box family protein
    NP_567916.2
    • SLOW MOTION (SLOMO); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT4G15475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16015640..16021230 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119475.3NP_567916.2  F-box family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567916.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GY34, Q9SMY8
      UniProtKB/TrEMBL
      A0A178V148, A0A5S9XY61
      Conserved Domains (3) summary
      cd09293
      Location:344523
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:371396
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:195234
      F-box-like