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    tRNAHis guanylyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817793, updated on 18-Sep-2024

    Summary

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    Official Full Name
    tRNAHis guanylyltransferase
    Primary source
    TAIR:AT2G32320
    Locus tag
    AT2G32320
    See related
    Araport:AT2G32320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32F6.16; T32F6_16
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    16
    Sequence:
    Chromosome: 2; NC_003071.7 (13726781..13731956)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uclacyanin 1 Neighboring gene CCT motif family protein Neighboring gene ncRNA Neighboring gene TraB family protein Neighboring gene Ubiquitin-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic Interactions and Molecular Evolution of the Duplicated Genes ICARUS2 and ICARUS1 Help Arabidopsis Plants Adapt to Different Ambient Temperatures. Méndez-Vigo B, et al. Plant Cell, 2019 Jun. PMID 30992321, Free PMC Article
    2. Plant mitochondria use two pathways for the biogenesis of tRNAHis. Placido A, et al. Nucleic Acids Res, 2010 Nov. PMID 20660484, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001161072.1
    NM_001161073.1
    NM_128791.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA guanylyltransferase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell cycle IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within growth IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in tRNA modification TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within vegetative to reproductive phase transition of meristem IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNAHis guanylyltransferase
    NP_001154544.1
    • tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G31580.1); Has 882 Blast hits to 461 proteins in 224 species: Archae - 94; Bacteria - 85; Metazoa - 268; Fungi - 254; Plants - 81; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink).
    NP_001154545.1
    • tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G31580.1); Has 883 Blast hits to 462 proteins in 224 species: Archae - 94; Bacteria - 87; Metazoa - 268; Fungi - 254; Plants - 79; Viruses - 2; Other Eukaryotes - 99 (source: NCBI BLink).
    NP_180791.3
    • tRNAHis guanylyltransferase; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G31580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13726781..13731956
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128791.4 → NP_180791.3  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180791.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4D6T2J0, A0A654F377
      Conserved Domains (2) summary
      pfam04446
      Location:275 → 401
      Thg1; tRNAHis guanylyltransferase
      pfam14413
      Location:405 → 510
      Thg1C; Thg1 C terminal domain

    2. NM_001161072.1 → NP_001154544.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154544.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4ISV6, F4ISV7, F4ISV8, Q6IDC3, Q9ZV60, Q9ZV61
      UniProtKB/TrEMBL
      A0A654F377
      Conserved Domains (3) summary
      COG4021
      Location:286 → 531
      Thg1; tRNA(His) 5'-end guanylyltransferase [Translation, ribosomal structure and biogenesis]
      pfam04446
      Location:287 → 413
      Thg1; tRNAHis guanylyltransferase
      pfam14413
      Location:417 → 522
      Thg1C; Thg1 C terminal domain

    3. NM_001161073.1 → NP_001154545.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154545.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F377
      Conserved Domains (3) summary
      COG4021
      Location:281 → 526
      Thg1; tRNA(His) 5'-end guanylyltransferase [Translation, ribosomal structure and biogenesis]
      pfam04446
      Location:282 → 408
      Thg1; tRNAHis guanylyltransferase
      pfam14413
      Location:412 → 517
      Thg1C; Thg1 C terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4ISV6.1

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