U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839944, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Protein kinase family protein
    Primary source
    TAIR:AT1G30640
    Locus tag
    AT1G30640
    See related
    Araport:AT1G30640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5I8.9; T5I8_9
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    14
    Sequence:
    Chromosome: 1; NC_003070.9 (10860619..10865074)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pentatricopeptide (PPR) repeat-containing protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Coatomer epsilon subunit Neighboring gene WRKY DNA-binding protein 14 Neighboring gene nucleic acid binding protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. An IRE-like AGC kinase gene, MtIRE, has unique expression in the invasion zone of developing root nodules in Medicago truncatula. Pislariu CI, et al. Plant Physiol, 2007 Jun. PMID 17237187, Free PMC Article
    2. Growth signalling pathways in Arabidopsis and the AGC protein kinases. Bögre L, et al. Trends Plant Sci, 2003 Sep. PMID 13678909
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_001332918.1
    NM_102801.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Protein kinase family protein
    NP_174352.1
    • Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 112792 Blast hits to 111447 proteins in 4260 species: Archae - 145; Bacteria - 14032; Metazoa - 41532; Fungi - 11959; Plants - 25354; Viruses - 416; Other Eukaryotes - 19354 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10860619..10865074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332917.1 → NP_001321465.1  Protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHD9, A0A384KEQ2, A0A7G2DZ46, F4I6E4
      Conserved Domains (1) summary
      cd05599
      Location:118 → 487
      STKc_NDR_like; Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

    2. NM_102801.3 → NP_174352.1  Protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174352.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHD9, A0A384KEQ2, A0A7G2DZ46, F4I6E4
      Conserved Domains (1) summary
      cd05599
      Location:118 → 487
      STKc_NDR_like; Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

    3. NM_001332918.1 → NP_001321464.1  Protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQX9, A0A7G2DZ46
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools