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    BLH6 BEL1-like homeodomain 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829613, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BLH6
    Official Full Name
    BEL1-like homeodomain 6
    Primary source
    TAIR:AT4G34610
    Locus tag
    AT4G34610
    See related
    Araport:AT4G34610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BEL1-like homeodomain 6; T4L20.190; T4L20_190
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    Genomic context

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    See BLH6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (16530346..16533362, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene G-box binding factor 6 Neighboring gene uncharacterized protein Neighboring gene small subunit ribosomal protein 16 Neighboring gene prostatic spermine-binding-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BEL1-LIKE HOMEODOMAIN6 and KNOTTED ARABIDOPSIS THALIANA7 interact and regulate secondary cell wall formation via repression of REVOLUTA. Liu Y, et al. Plant Cell, 2014 Dec. PMID 25490916, Free PMC Article
    2. A role for OVATE FAMILY PROTEIN1 (OFP1) and OFP4 in a BLH6-KNAT7 multi-protein complex regulating secondary cell wall formation in Arabidopsis thaliana. Liu Y, et al. Plant Signal Behav, 2015. PMID 26107719, Free PMC Article
    3. A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins. Hackbusch J, et al. Proc Natl Acad Sci U S A, 2005 Mar 29. PMID 15781858, Free PMC Article
    4. Enhanced Y1H assays for Arabidopsis. Gaudinier A, et al. Nat Methods, 2011 Oct 30. PMID 22037706, Free PMC Article
    5. A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. Smit ME, et al. Plant Cell, 2020 Feb. PMID 31806676, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. This study shows that OFP1 and OFP4 enhance the repression activity of BLH6, supporting a role for these OFPs as components of a putative multi-protein transcription regulatory complex containing BLH6 and KNAT7.
      Title: A role for OVATE FAMILY PROTEIN1 (OFP1) and OFP4 in a BLH6-KNAT7 multi-protein complex regulating secondary cell wall formation in Arabidopsis thaliana.
    2. BLH6 and KNAT7 bind to the REV promoter and repress REV expression.
      Title: BEL1-LIKE HOMEODOMAIN6 and KNOTTED ARABIDOPSIS THALIANA7 interact and regulate secondary cell wall formation via repression of REVOLUTA.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001125644.1
    NM_001342295.1
    NM_001342296.1
    NM_119627.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BEL1-like homeodomain 6
    NP_001119116.1
    • BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_195187.1
    • BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 4819 Blast hits to 4819 proteins in 327 species: Archae - 0; Bacteria - 2; Metazoa - 1855; Fungi - 314; Plants - 2477; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16530346..16533362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119627.4 → NP_195187.1  BEL1-like homeodomain 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195187.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65685
      UniProtKB/TrEMBL
      A0A178UVN4
      Conserved Domains (2) summary
      smart00574
      Location:135 → 269
      POX; domain associated with HOX domains
      pfam05920
      Location:332 → 371
      Homeobox_KN; Homeobox KN domain

    2. NM_001342295.1 → NP_001328814.1  BEL1-like homeodomain 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65685
      UniProtKB/TrEMBL
      A0A178UVN4

    3. NM_001342296.1 → NP_001328815.1  BEL1-like homeodomain 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65685
      UniProtKB/TrEMBL
      A0A178UVN4

    4. NM_001125644.1 → NP_001119116.1  BEL1-like homeodomain 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119116.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65685
      UniProtKB/TrEMBL
      A0A178UVN4
      Conserved Domains (2) summary
      smart00574
      Location:135 → 269
      POX; domain associated with HOX domains
      pfam05920
      Location:332 → 371
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O65685.1

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