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    AU041480 expressed sequence AU041480 [ Mus musculus (house mouse) ]

    Gene ID: 320936, updated on 17-Aug-2024

    Summary

    Official Symbol
    AU041480provided by MGI
    Official Full Name
    expressed sequence AU041480provided by MGI
    Primary source
    MGI:MGI:2146998
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D030054H15Rik
    Expression
    Biased expression in ovary adult (RPKM 1.1), frontal lobe adult (RPKM 0.2) and 2 other tissues See more
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    Genomic context

    See AU041480 in Genome Data Viewer
    Location:
    17; 17 A1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (8051054..8056058, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (7832222..7837226, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33158 Neighboring gene STARR-seq mESC enhancer starr_41759 Neighboring gene fibronectin type III domain containing 1 Neighboring gene adaptor-related protein complex 3, sigma 1 subunit pseudogene Neighboring gene predicted gene 1604A Neighboring gene T cell activation Rho GTPase activating protein Neighboring gene radial spoke 3A homolog (Chlamydomonas)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_168912.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164983

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      8051054..8056058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)