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    exonuclease V-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836159, updated on 18-Sep-2024

    Summary

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    Official Full Name
    exonuclease V-like protein
    Primary source
    TAIR:AT5G60370
    Locus tag
    AT5G60370
    See related
    Araport:AT5G60370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUF9.2; MUF9_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (24282666..24285061)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene aleurain-like protease Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene GTP binding Elongation factor Tu family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001345412.1
    NM_125430.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables single-stranded DNA 5'-3' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    exonuclease V-like protein
    NP_200845.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24282666..24285061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125430.3 → NP_200845.1  exonuclease V-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200845.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XC1, Q9FKK6
      UniProtKB/TrEMBL
      A0A178UKB8, A0A5S9YFY9
      Conserved Domains (1) summary
      pfam09810
      Location:107 → 390
      Exo5; Exonuclease V - a 5' deoxyribonuclease

    2. NM_001345412.1 → NP_001332244.1  exonuclease V-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGB8
      Conserved Domains (1) summary
      pfam09810
      Location:107 → 263
      Exo5; Exonuclease V - a 5' deoxyribonuclease
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FKK6.1

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