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    F-box protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829606, updated on 3-Dec-2024

    Summary

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    Official Full Name
    F-box protein
    Primary source
    TAIR:AT4G34550
    Locus tag
    AT4G34550
    See related
    Araport:AT4G34550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4L20.130; T4L20_130
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (16502532..16504254)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 3-ketoacyl-CoA synthase 18 Neighboring gene NmrA-like negative transcriptional regulator family protein Neighboring gene cryptochrome-interacting basic-helix-loop-helix 1 Neighboring gene Ribosomal protein S25 family protein Neighboring gene uncharacterized protein Neighboring gene thymidylate synthase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PCH1 and PCHL promote photomorphogenesis in plants by controlling phytochrome B dark reversion. Enderle B, et al. Nat Commun, 2017 Dec 20. PMID 29263319, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001342288.1
    NM_119620.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of photomorphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box protein
    NP_001320137.1
    • BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G16365.3); Has 37 Blast hits to 37 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16502532..16504254
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342288.1 → NP_001320137.1  F-box protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65680
      UniProtKB/TrEMBL
      A0A5S9XYL4, A0A654FVG2

    2. NM_119620.2 → NP_195181.1  F-box protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195181.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65680
      UniProtKB/TrEMBL
      A0A5S9XYL4, A0A654FVG2
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials