U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CYP79C1 cytochrome P450, family 79, subfamily C, polypeptide 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844275, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CYP79C1
    Official Full Name
    cytochrome P450, family 79, subfamily C, polypeptide 1
    Primary source
    TAIR:AT1G79370
    Locus tag
    AT1G79370
    See related
    Araport:AT1G79370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 79; polypeptide 1; polypeptide 1''; subfamily C; YUP8H12R.1; YUP8H12R_1
    Summary
    member of CYP79C
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CYP79C1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (29857934..29860163)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene metacaspase 4 Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene organic cation/carnitine transporter 2 Neighboring gene Ca(2)-dependent phospholipid-binding protein (Copine) family Neighboring gene centrosomal protein Neighboring gene cation/H+ exchanger 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytochrome P450, family 79, subfamily C, polypeptide 1
    NP_178055.2
    • ''cytochrome P450, family 79, subfamily C, polypeptide 1'' (CYP79C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 79c2 (TAIR:AT1G58260.1); Has 27664 Blast hits to 27484 proteins in 1529 species: Archae - 45; Bacteria - 2601; Metazoa - 10490; Fungi - 5132; Plants - 8509; Viruses - 0; Other Eukaryotes - 887 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29857934..29860163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106585.2 → NP_178055.2  cytochrome P450, family 79, subfamily C, polypeptide 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178055.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6I5, A0A5S9WVR1, F4IF38
      Conserved Domains (1) summary
      cd20658
      Location:75 → 533
      CYP79; cytochrome P450 family 79
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools