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    NF-YA7 nuclear factor Y, subunit A7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839929, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NF-YA7
    Official Full Name
    nuclear factor Y, subunit A7
    Primary source
    TAIR:AT1G30500
    Locus tag
    AT1G30500
    See related
    Araport:AT1G30500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''nuclear factor Y; F26G16.12; F26G16_12; nuclear factor Y; subunit A7; subunit A7''
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    Genomic context

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    See NF-YA7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (10804450..10806428, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Neighboring gene ncRNA Neighboring gene root FNR 2 Neighboring gene GATA zinc finger protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis NF-YB subunits LEC1 and LEC1-LIKE activate transcription by interacting with seed-specific ABRE-binding factors. Yamamoto A, et al. Plant J, 2009 Jun. PMID 19207209
    2. Studies on differential nuclear translocation mechanism and assembly of the three subunits of the Arabidopsis thaliana transcription factor NF-Y. Hackenberg D, et al. Mol Plant, 2012 Jul. PMID 22199235
    3. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102786.3
    NM_179402.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nuclear factor Y, subunit A7
    NP_174338.2
    • ''nuclear factor Y, subunit A7'' (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
    NP_849733.1
    • ''nuclear factor Y, subunit A7'' (NF-YA7); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, specific transcriptional repressor activity; INVOLVED IN: negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A4 (TAIR:AT2G34720.1); Has 681 Blast hits to 681 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 130; Plants - 381; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10804450..10806428 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179402.4 → NP_849733.1  nuclear factor Y, subunit A7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849733.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84JP1, Q9S9P9
      Conserved Domains (1) summary
      smart00521
      Location:97 → 158
      CBF; CCAAT-Binding transcription Factor

    2. NM_102786.3 → NP_174338.2  nuclear factor Y, subunit A7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174338.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I6C2
      Conserved Domains (1) summary
      smart00521
      Location:93 → 154
      CBF; CCAAT-Binding transcription Factor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84JP1.1

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