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    CYP71B30P cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824496, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71B30P
    Official Full Name
    cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene
    Primary source
    TAIR:AT3G53290
    Locus tag
    AT3G53290
    See related
    Araport:AT3G53290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 71; polypeptide 30 pseudogene; polypeptide 30 pseudogene''; subfamily B
    Summary
    missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html
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    Genomic context

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    See CYP71B30P in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (19758157..19759603)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein Neighboring gene cytochrome p450 71b5 Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene
    NP_190897.1
    • ''cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene'' (CYP71B30P); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 8 (TAIR:AT5G35715.1); Has 29738 Blast hits to 29642 proteins in 1574 species: Archae - 51; Bacteria - 3015; Metazoa - 10995; Fungi - 5587; Plants - 8999; Viruses - 3; Other Eukaryotes - 1088 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19758157..19759603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115189.1 → NP_190897.1  cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190897.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FHU7, Q9SCN3
      Conserved Domains (1) summary
      cl41757
      Location:5 → 398
      cytochrome_P450; cytochrome P450 (CYP) superfamily
    Nucleotide Protein
    Heading Accession and Version

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