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    alpha-(1,6)-fucosyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833014, updated on 18-Sep-2024

    Summary

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    Official Full Name
    alpha-(1,6)-fucosyltransferase
    Primary source
    TAIR:AT5G28910
    Locus tag
    AT5G28910
    See related
    Araport:AT5G28910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7P1.2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (10930539..10933188, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Calcium-binding EF-hand family protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036886.3
    NM_122775.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alpha-(1,6)-fucosyltransferase
    NP_001031963.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28960.1); Has 82 Blast hits to 80 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    NP_198243.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      10930539..10933188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036886.3 → NP_001031963.1  alpha-(1,6)-fucosyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031963.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UL16, Q6ICX5
      Conserved Domains (1) summary
      cl16914
      Location:169 → 518
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

    2. NM_122775.5 → NP_198243.2  alpha-(1,6)-fucosyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198243.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KA27
      Conserved Domains (1) summary
      cl16914
      Location:42 → 391
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
    Nucleotide Protein
    Heading Accession and Version

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