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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823187, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G42150
    Locus tag
    AT3G42150
    See related
    Araport:AT3G42150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (14309275..14311638)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene zinc ion binding / nucleic acid binding protein Neighboring gene uncharacterized protein Neighboring gene glycosyl hydrolase 9B9 protein Neighboring gene glycosyl hydrolase family 9 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001035721.2
    NM_114082.3
    NM_202648.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001030798.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_566862.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_974377.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      14309275..14311638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114082.3 → NP_566862.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566862.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
      Conserved Domains (1) summary
      pfam03458
      Location:15 → 60
      UPF0126; UPF0126 domain

    2. NM_001035721.2 → NP_001030798.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
      Conserved Domains (1) summary
      pfam03458
      Location:15 → 60
      UPF0126; UPF0126 domain

    3. NM_202648.3 → NP_974377.1  uncharacterized protein AT3G42150 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974377.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCF1, A0A384LCP0, A0A654FC67, Q9M2N7
      Conserved Domains (1) summary
      pfam03458
      Location:15 → 60
      UPF0126; UPF0126 domain
    Nucleotide Protein
    Heading Accession and Version

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