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    Drought-responsive family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819739, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Drought-responsive family protein
    Primary source
    TAIR:AT3G05700
    Locus tag
    AT3G05700
    See related
    Araport:AT3G05700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18C1.3; F18C1_3
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (1681817..1684597, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cystatin/monellin superfamily protein Neighboring gene nuclear factor Y, subunit A2 Neighboring gene ncRNA Neighboring gene syntaxin of plants 43 Neighboring gene importin alpha isoform 7 Neighboring gene hypothetical protein (DUF3511)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis drought-induced protein Di19-3 participates in plant response to drought and high salinity stresses. Qin LX, et al. Plant Mol Biol, 2014 Dec. PMID 25218132
    2. The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways. Milla MA, et al. Plant Mol Biol, 2006 May. PMID 16786289
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111444.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Drought-responsive family protein
    NP_187221.2
    • Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT5G26990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1681817..1684597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337603.1 → NP_001327249.1  Drought-responsive family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LRR2
      Conserved Domains (2) summary
      pfam05605
      Location:42 → 95
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:115 → 187
      Di19_C; Stress-induced protein Di19, C-terminal

    2. NM_111444.5 → NP_187221.2  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187221.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84J70, Q9M9X5
      UniProtKB/TrEMBL
      A0A178V6L9, A0A5S9X9H7, A0A654F4F1
      Conserved Domains (2) summary
      pfam05605
      Location:42 → 95
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:115 → 218
      Di19_C; Stress-induced protein Di19, C-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84J70.1

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