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    CG10959 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31743, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10959provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030010
    Locus tag
    Dmel_CG10959
    See related
    AllianceGenome:FB:FBgn0030010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10959
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10959 in Genome Data Viewer
    Location:
    7D16-7D16; 1-22 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8148783..8150686)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8042816..8044719)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene G protein beta subunit 5 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Helena and BS: Two Travellers between the Genera Drosophila and Zaprionus. Simão MC, et al. Genome Biol Evol, 2018 Oct 1. PMID 30165545, Free PMC Article
    2. Drosophila Gut Immune Pathway Suppresses Host Development-Promoting Effects of Acetic Acid Bacteria. Lee J, et al. Mol Cells, 2023 Oct 31. PMID 37853687, Free PMC Article
    3. A large-scale resource for tissue-specific CRISPR mutagenesis in Drosophila. Port F, et al. Elife, 2020 Feb 13. PMID 32053108, Free PMC Article
    4. Affinity Density: a novel genomic approach to the identification of transcription factor regulatory targets. Hazelett DJ, et al. Bioinformatics, 2009 Jul 1. PMID 19401399, Free PMC Article
    5. Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster. Manta AK, et al. Fly (Austin), 2017 Apr 3. PMID 27960592, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10959-PA
    CG10959-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8148783..8150686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132223.4 → NP_572451.1  uncharacterized protein Dmel_CG10959, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572451.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W3J2
      Related
      FBpp0071108
      Conserved Domains (3) summary
      COG5048
      Location:258 → 416
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:289 → 308
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:328 → 353
      zf-H2C2_2; Zinc-finger double domain

    2. NM_001272395.1 → NP_001259324.1  uncharacterized protein Dmel_CG10959, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259324.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PHD3
      Conserved Domains (3) summary
      COG5048
      Location:147 → 414
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:287 → 306
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:326 → 351
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PHD3 M9PHD3
    Q9W3J2 Q9W3J2

    Gene LinkOut

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