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    Rlb1 Rlb1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41139, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Rlb1provided by FlyBase
    Official Full Name
    Rlb1provided by FlyBase
    Primary source
    FLYBASE:FBgn0014022
    Locus tag
    Dmel_CG8161
    See related
    AllianceGenome:FB:FBgn0014022
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG8161; Dmel\CG8161; Ov30; Rlb
    Summary
    Predicted to be involved in maturation of SSU-rRNA. Located in membrane and nucleus. Is expressed in embryonic/larval midgut and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Rlb1 in Genome Data Viewer
    Location:
    85D19-85D19; 3-48 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9513327..9514827)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5339049..5340549)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene rumpelstiltskin Neighboring gene Ras oncogene at 85D Neighboring gene mitochondrial ribosomal protein L47 Neighboring gene uncharacterized protein Neighboring gene mir-2283 stem loop Neighboring gene Lysine demethylase 3 Neighboring gene blistery

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression during embryogenesis of three genes clustered in the Ras1 region of Drosophila melanogaster. Ezer ST, et al. Dev Dyn, 1994 Oct. PMID 7873789
    2. Differential activity of Ras1 during patterning of the Drosophila dorsoventral axis. Schnorr JD, et al. Genetics, 1996 Dec. PMID 8978043, Free PMC Article
    3. Ras controls growth, survival and differentiation in the Drosophila eye by different thresholds of MAP kinase activity. Halfar K, et al. Development, 2001 May. PMID 11290305
    4. Ras promotes cell survival by antagonizing both JNK and Hid signals in the Drosophila eye. Wu Y, et al. BMC Dev Biol, 2009 Oct 20. PMID 19840402, Free PMC Article
    5. Ras1 interacts with multiple new signaling and cytoskeletal loci in Drosophila eggshell patterning and morphogenesis. Schnorr JD, et al. Genetics, 2001 Oct. PMID 11606538, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of 90S preribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Rlb1
    Names
    CG8161-PA
    Rlb1-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9513327..9514827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057751.4 → NP_477099.1  Rlb1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477099.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q27411, Q3YMU8
      Related
      FBpp0081540
      Conserved Domains (2) summary
      PTZ00108
      Location:3 → 345
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      pfam09073
      Location:389 → 461
      BUD22; BUD22
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q27411 Q27411
    Q3YMU8 Q3YMU8
    Q95S53 Q95S53

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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