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    Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827683, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pectinacetylesterase family protein
    Primary source
    TAIR:AT4G19420
    Locus tag
    AT4G19420
    See related
    Araport:AT4G19420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PAE8; pectin acetylesterase 8; T5K18.200; T5K18_200
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    13
    Sequence:
    Chromosome: 4; NC_003075.7 (10587166..10591633, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Profilin family protein Neighboring gene Pectinacetylesterase family protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants. de Souza A, et al. Planta, 2014 Nov. PMID 25115560, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data show that the pae8 (At4g19420) and pae9 (At5g23870) mutants have increased pectin acetate content.
      Title: Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001341336.1
    NM_001341337.1
    NM_001341338.1
    NM_118062.7

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pectinacetylesterase family protein
    NP_001319996.1
    • Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
    NP_193677.2
    • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10587166..10591633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118062.7 → NP_193677.2  Pectinacetylesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193677.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JT68, O65713, Q6DBP4
      UniProtKB/TrEMBL
      A0A5S9XUD7, A0A654FQW0
      Conserved Domains (1) summary
      pfam03283
      Location:19 → 371
      PAE; Pectinacetylesterase

    2. NM_001341336.1 → NP_001319996.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JT68, O65713, Q6DBP4
      UniProtKB/TrEMBL
      A0A5S9XUD7, A0A654FQW0
      Conserved Domains (1) summary
      pfam03283
      Location:19 → 371
      PAE; Pectinacetylesterase

    3. NM_001341337.1 → NP_001328920.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B645
      Conserved Domains (1) summary
      pfam03283
      Location:19 → 271
      PAE; Pectinacetylesterase

    4. NM_001341338.1 → NP_001328921.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B651, A0A5S9XUD7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6DBP4.1

    Gene LinkOut

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