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    hypothetical protein (DUF1677) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821825, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF1677)
    Primary source
    TAIR:AT3G22540
    Locus tag
    AT3G22540
    See related
    Araport:AT3G22540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (7984076..7984833, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pre-rRNA-processing protein TSR2, conserved region Neighboring gene spindle assembly abnormal protein Neighboring gene heat shock protein Neighboring gene NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_113153.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF1677)
    NP_188893.1
    • Protein of unknown function (DUF1677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1677, plant (InterPro:IPR012876); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1677) (TAIR:AT4G14819.1); Has 245 Blast hits to 245 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7984076..7984833 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113153.4 → NP_188893.1  hypothetical protein (DUF1677) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188893.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5A0, A0A384LJQ2, Q9LJ92
      Conserved Domains (1) summary
      pfam07911
      Location:3 → 87
      DUF1677; Protein of unknown function (DUF1677)
    Nucleotide Protein
    Heading Accession and Version

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