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    VATG3 vacuolar ATP synthase G3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828701, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VATG3
    Official Full Name
    vacuolar ATP synthase G3
    Primary source
    TAIR:AT4G25950
    Locus tag
    AT4G25950
    See related
    Araport:AT4G25950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20B18.60; F20B18_60; vacuolar ATP synthase G3; VHA-G3
    Summary
    V-ATPase G-subunit like protein
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    Genomic context

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    See VATG3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (13173443..13174541, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF295) Neighboring gene ENTH/ANTH/VHS superfamily protein Neighboring gene P-glycoprotein 2 Neighboring gene phosphatidylserine decarboxylase 3 Neighboring gene peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341769.1
    NM_118728.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    part_of vacuolar proton-transporting V-type ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    vacuolar ATP synthase G3
    NP_194325.1
    • vacuolar ATP synthase G3 (VATG3); FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; INVOLVED IN: proton transport; LOCATED IN: vacuole; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Vacuolar (H+)-ATPase G subunit (InterPro:IPR005124); BEST Arabidopsis thaliana protein match is: vacuolar membrane ATPase 10 (TAIR:AT3G01390.2); Has 543 Blast hits to 543 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 270; Fungi - 119; Plants - 123; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13173443..13174541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118728.4 → NP_194325.1  vacuolar ATP synthase G3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194325.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZH0
      UniProtKB/TrEMBL
      A0A178UYW4
      Conserved Domains (1) summary
      pfam03179
      Location:5 → 105
      V-ATPase_G; Vacuolar (H+)-ATPase G subunit

    2. NM_001341769.1 → NP_001328540.1  vacuolar ATP synthase G3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4Z3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZH0.1

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