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    LOC100283475 peptidyl-prolyl cis-trans isomerase CYP19-4 [ Zea mays ]

    Gene ID: 100283475, updated on 27-Nov-2024

    Summary

    Gene symbol
    LOC100283475
    Gene description
    peptidyl-prolyl cis-trans isomerase CYP19-4
    Locus tag
    ZEAMMB73_Zm00001d014732
    See related
    EnsemblRapid:Zm00001eb227460
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G084521
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    Genomic context

    See LOC100283475 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (61107923..61110155)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (61076703..61078893)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111589269 Neighboring gene Peptidyl-prolyl cis-trans isomerase CYP20-1 Neighboring gene uncharacterized LOC100274838 Neighboring gene arogenate dehydrogenase

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    peptidyl-prolyl cis-trans isomerase CYP19-4
    Names
    Peptidyl-prolyl cis-trans isomerase, microsomal
    putative peptidyl-prolyl cis-trans isomerase family protein
    NP_001149847.1
    XP_020408960.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001156375.2NP_001149847.1  peptidyl-prolyl cis-trans isomerase CYP19-4 precursor

      See identical proteins and their annotated locations for NP_001149847.1

      Status: VALIDATED

      Source sequence(s)
      BT042271, EC879834
      UniProtKB/TrEMBL
      A0A1D6GVX7, A0A3L6ELI7, A0A8J8XFN5, B6TIP7
      Related
      Zm00001eb227460_P001, Zm00001eb227460_T001
      Conserved Domains (1) summary
      cd01926
      Location:46211
      cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      61107923..61110155
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020553371.2XP_020408960.1  peptidyl-prolyl cis-trans isomerase CYP19-4 isoform X1

      UniProtKB/TrEMBL
      A0A1D6GVX5, A0A1D6GVX7
      Related
      Zm00001eb227460_P003, Zm00001eb227460_T003
      Conserved Domains (1) summary
      cd01926
      Location:51216
      cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...