LOC100502181 uncharacterized LOC100502181 [Zea mays] - Gene

Summary

Gene symbol: LOC100502181
Gene description: uncharacterized LOC100502181
Locus tag: ZEAMMB73_Zm00001d018225
See related: EnsemblRapid:Zm00001eb256420
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Zea mays
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as: GRMZM2G145690; HDZIV14_OCL14
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Genomic context

Location:: chromosome: 5

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
103	current	Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1)	5	NC_050100.1 (219505347..219509541)
102.20200423	previous assembly	B73 RefGen_v4 (GCF_000005005.2)	5	NC_024463.2 (216949014..216953208)

Chromosome 5 - NC_050100.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables lipid binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: Homeobox-leucine zipper protein ROC8-like

Names: homeodomain leucine zipper family IV protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001323626.1 → NP_001310555.1 Homeobox-leucine zipper protein ROC8-like

Status: VALIDATED

Source sequence(s)

BT087312, CABHLF010000016, EC902615

UniProtKB/TrEMBL

G2J5S7, G2J5S8

Related

Zm00001eb256420_P001, Zm00001eb256420_T001

Conserved Domains (2) summary

cd08875
Location:204 → 432

START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins

pfam00046
Location:20 → 73

Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Range

219505347..219509541

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GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001196658.1: Suppressed sequence

Description

NM_001196658.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.