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    Apoptosis inhibitory protein 5 (API5) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839777, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Apoptosis inhibitory protein 5 (API5)
    Primary source
    TAIR:AT1G29030
    Locus tag
    AT1G29030
    See related
    Araport:AT1G29030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28N24.26; F28N24_26
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    17
    Sequence:
    Chromosome: 1; NC_003070.9 (10128999..10133992, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Calcium-binding EF-hand family protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 50S ribosomal protein L34 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332830.1
    NM_102644.5

    General protein information

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    Preferred Names
    Apoptosis inhibitory protein 5 (API5)
    NP_174198.2
    • Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT2G34040.1); Has 834 Blast hits to 647 proteins in 164 species: Archae - 2; Bacteria - 50; Metazoa - 244; Fungi - 88; Plants - 132; Viruses - 7; Other Eukaryotes - 311 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10128999..10133992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102644.5 → NP_174198.2  Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174198.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAB7, A0A654EDR9, Q8GXH2
      Conserved Domains (1) summary
      pfam05918
      Location:12 → 520
      API5; Apoptosis inhibitory protein 5 (API5)

    2. NM_001332830.1 → NP_001322605.1  Apoptosis inhibitory protein 5 (API5) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAB7, A0A1P8AUI7, A0A654EDR9
    Nucleotide Protein
    Heading Accession and Version

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