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    AAP7 amino acid permease 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832446, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AAP7
    Official Full Name
    amino acid permease 7
    Primary source
    TAIR:AT5G23810
    Locus tag
    AT5G23810
    See related
    Araport:AT5G23810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    amino acid permease 7; MRO11.15; MRO11_15
    Summary
    Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.
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    Genomic context

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    See AAP7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (8028238..8030888)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene galactinol synthase 5 Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 10) Neighboring gene MD-2-related lipid recognition domain-containing protein Neighboring gene MD-2-related lipid recognition domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High affinity amino acid transporters specifically expressed in xylem parenchyma and developing seeds of Arabidopsis. Okumoto S, et al. J Biol Chem, 2002 Nov 22. PMID 12244056
    2. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
    3. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036857.1
    NM_001343829.1
    NM_122286.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    NOT enables amino acid transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables amino acid transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within amino acid transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    amino acid permease 7
    NP_001031934.1
    • amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink).
    NP_197770.1
    • amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 8 (TAIR:AT1G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8028238..8030888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343827.1 → NP_001330892.1  amino acid permease 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC87

    2. NM_001343828.1 → NP_001330893.1  amino acid permease 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC79

    3. NM_122286.4 → NP_197770.1  amino acid permease 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197770.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V350, Q941E6, Q9FF99
      UniProtKB/TrEMBL
      A0A178UAY9
      Conserved Domains (1) summary
      cl00456
      Location:26 → 462
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    4. NM_001343829.1 → NP_001330894.1  amino acid permease 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC87

    5. NM_001036857.1 → NP_001031934.1  amino acid permease 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031934.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FF99
      Conserved Domains (1) summary
      cl00456
      Location:26 → 338
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FF99.1

    Gene LinkOut

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