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    LOC100191654 Fatty-acid-binding protein 2 [ Zea mays ]

    Gene ID: 100191654, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC100191654
    Gene description
    Fatty-acid-binding protein 2
    Locus tag
    ZEAMMB73_Zm00001d018278
    See related
    EnsemblRapid:Zm00001eb256920
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G095778
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    Genomic context

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    See LOC100191654 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 5 NC_050100.1 (220358185..220362434)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 5 NC_024463.2 (217822368..217826362)

    Chromosome 5 - NC_050100.1Genomic Context describing neighboring genes Neighboring gene LOC103634933-like pseudogene Neighboring gene uncharacterized LOC100282335 Neighboring gene uncharacterized LOC100285574 Neighboring gene uncharacterized LOC100272897

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intramolecular lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast stroma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Fatty-acid-binding protein 2-like; uncharacterized protein LOC100191654

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001137083.1 → NP_001130555.1  Fatty-acid-binding protein 2-like

      See identical proteins and their annotated locations for NP_001130555.1

      Status: PROVISIONAL

      Source sequence(s)
      BT033813
      UniProtKB/TrEMBL
      B4F9M5, B6SSF1
      Related
      Zm00001eb256920_P001, Zm00001eb256920_T001
      Conserved Domains (1) summary
      PLN03175
      Location:8 → 425
      PLN03175; hypothetical protein; Provisional

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050100.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      220358185..220362434
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035967659.1 → XP_035823552.1  uncharacterized protein LOC100191654 isoform X1

      UniProtKB/TrEMBL
      A0A804PNT8, C4JC67
      Related
      Zm00001eb256920_P002, Zm00001eb256920_T002
      Conserved Domains (1) summary
      cl03589
      Location:1 → 250
      Chalcone_3; Chalcone isomerase-like
    Nucleotide Protein
    Heading Accession and Version

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