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    Phenazine biosynthesis PhzC/PhzF protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838493, updated on 18-Sep-2024

    Summary

    Official Full Name
    Phenazine biosynthesis PhzC/PhzF protein
    Primary source
    TAIR:AT1G03210
    Locus tag
    AT1G03210
    See related
    Araport:AT1G03210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K9.19; F15K9_19
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (782904..784346)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RAD3-like DNA-binding helicase protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene Eukaryotic aspartyl protease family protein

    General gene information

    NM_100203.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Phenazine biosynthesis PhzC/PhzF protein
    NP_171820.1
    • Phenazine biosynthesis PhzC/PhzF protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT4G02860.1); Has 4142 Blast hits to 4139 proteins in 1263 species: Archae - 52; Bacteria - 3137; Metazoa - 121; Fungi - 124; Plants - 90; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      782904..784346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331396.1NP_001321638.1  Phenazine biosynthesis PhzC/PhzF protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WF07, A0A1P8ARL5, B9DHG8
    2. NM_100203.3NP_171820.1  Phenazine biosynthesis PhzC/PhzF protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171820.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WF07, A0A654E7F5, B9DHG8, Q9ZVS2
      Conserved Domains (1) summary
      pfam02567
      Location:12282
      PhzC-PhzF; Phenazine biosynthesis-like protein