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    F-box protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827473, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box protein (DUF295)
    Primary source
    TAIR:AT4G17565
    Locus tag
    AT4G17565
    See related
    Araport:AT4G17565
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FCAALL.44
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (9782508..9783644, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene dynamin Neighboring gene Major facilitator superfamily protein Neighboring gene Ribosomal protein L19 family protein Neighboring gene GATA transcription factor 26 Neighboring gene Bax inhibitor-1 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    F-box protein (DUF295)
    NP_193490.1
    • CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G05970.1); Has 496 Blast hits to 483 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 496; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9782508..9783644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117863.1 → NP_193490.1  F-box protein (DUF295) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193490.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EA00
      UniProtKB/TrEMBL
      A0A7G2F0B2
      Conserved Domains (3) summary
      PLN03215
      Location:18 → 331
      PLN03215; ascorbic acid mannose pathway regulator 1; Provisional
      pfam00646
      Location:16 → 62
      F-box; F-box domain
      pfam03478
      Location:297 → 348
      DUF295; Protein of unknown function (DUF295)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3EA00.1

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