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    taf-7.1 TAFII55 protein conserved region domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 192053, updated on 9-Dec-2024

    Summary

    Official Symbol
    taf-7.1
    Official Full Name
    TAFII55 protein conserved region domain-containing protein
    Primary source
    WormBase:WBGene00006388
    Locus tag
    CELE_F54F7.1
    See related
    AllianceGenome:WB:WBGene00006388
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable histone acetyltransferase regulator activity and transcription coactivator activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Orthologous to human TAF7 (TATA-box binding protein associated factor 7) and TAF7L (TATA-box binding protein associated factor 7 like). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See taf-7.1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (11836068..11837478, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Girdin Neighboring gene ZP domain-containing protein Neighboring gene pseudo

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    contributes_to RNA polymerase II general transcription initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histone acetyltransferase regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables transcription coactivator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase II preinitiation complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in RNA polymerase II preinitiation complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription factor TFIID complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription factor TFIID complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    TAFII55 protein conserved region domain-containing protein
    NP_509976.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11836068..11837478 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077575.4NP_509976.1  TAFII55 protein conserved region domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509976.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20788
      Conserved Domains (1) summary
      pfam04658
      Location:23208
      TAFII55_N; TAFII55 protein conserved region