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    H42K12.3 Apple domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180474, updated on 9-Dec-2024

    Summary

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    Official Symbol
    H42K12.3
    Official Full Name
    Apple domain-containing protein
    Primary source
    WormBase:WBGene00019272
    Locus tag
    CELE_H42K12.3
    See related
    AllianceGenome:WB:WBGene00019272
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in anatomical structure morphogenesis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See H42K12.3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (1311605..1316640)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 3-phosphoinositide-dependent protein kinase 1 Neighboring gene CX domain-containing protein Neighboring gene Transthyretin-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Apple domain-containing protein
    NP_508240.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      1311605..1316640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075839.9 → NP_508240.1  Apple domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508240.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17347
      Conserved Domains (3) summary
      smart00209
      Location:385 → 424
      TSP1; Thrombospondin type 1 repeats
      smart00473
      Location:28 → 113
      PAN_AP; divergent subfamily of APPLE domains
      pfam00024
      Location:127 → 203
      PAN_1; PAN domain
    Nucleotide Protein
    Heading Accession and Version

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